fixation time

Waxman D 2011 A compact result for the time-dependent probability of fixation at a neutral locus. J Theor Biol 274:131-135.

  • an important feature of the form of Pfix(τ;p) given in Eq. (3) is that the smaller the value of τ, the smaller the number of terms that need to be included in the sum for good accuracy
  • this is precisely the opposite behaviour to Kimura's result in Eq. (2)
  • the approximation of Pfix(τ;p) in Eq. (5) has the feature that it equals p at the time τ = π ≃ 3.14
  • beyond this value of τ the approximation exceeds p, which is the largest value that Pfix(τ;p) can take
  • a simple way to proceed is to use Eq. (5) for τ < 2 and Eq. (6) for τ ≥ 2
  • a closely related quantity is the distribution of the random time to fixation, Tfix, given that fixation ultimately occurs
  • the probability that Tfix is smaller than t is given by Prob(Tfix < t) = Pfix(τ;p) / p